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Commit a7af68bb authored by Alexis Mergez's avatar Alexis Mergez
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Update .gitlab-ci.yml

parent d283cf0e
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1 merge request!9v1.4
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......@@ -22,7 +22,7 @@ shallow_run_workflow:
- mkdir data
- ln -s example data/haplotypes
- pwd && ls
- apptainer run apps/snakebox.sif snakemake -c1 --dag > workflow.dot
- apptainer run apps/snakebox.sif 'pwd && ls && snakemake -c1 --dag > workflow.dot'
artifacts:
paths:
- workflow.dot
......
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